Pseudomonas protegens Pf-5, PFL_3962

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3962
Name
Replicon chromosome
Genomic location 4574487 - 4575812 (- strand)

Cross-References

RefSeq YP_261062.1
GI 70731321
Entrez 3477720
INSDC AAY93226.1
NCBI Locus Tag PFL_3962
UniParc UPI000054DA78
UniProtKB Acc Q4K9M1
UniProtKB ID Q4K9M1_PSEF5
UniRef100 UniRef100_Q4K9M1
UniRef50 UniRef50_I7CBF3
UniRef90 UniRef90_Q4K9M1

Product

Feature Type CDS
Coding Frame 1
Product Name
major facilitator family transporter
Synonyms
Evidence for Translation
Charge (pH 7) 9.25
Kyte-Doolittle Hydrophobicity Value 0.758
Molecular Weight (kDa) 46856.9
Isoelectric Point (pI) 9.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 230 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003795 (821 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3962

Human Homologs

References

No references are associated with this feature.