Pseudomonas protegens Pf-5, PFL_4083

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4083
Name
Replicon chromosome
Genomic location 4711831 - 4713222 (+ strand)

Cross-References

RefSeq YP_261180.1
GI 70731439
Entrez 3476384
INSDC AAY93344.1
NCBI Locus Tag PFL_4083
UniParc UPI000054DAEC
UniProtKB Acc Q4K9A3
UniProtKB ID Q4K9A3_PSEF5
UniRef100 UniRef100_Q4K9A3
UniRef50 UniRef50_G8Q470
UniRef90 UniRef90_Q4K9A3

Product

Feature Type CDS
Coding Frame 1
Product Name
NodT family efflux transporter outer membrane factor lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 0.94
Kyte-Doolittle Hydrophobicity Value -0.280
Molecular Weight (kDa) 50092.6
Isoelectric Point (pI) 7.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 289 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003136 (484 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4083

Human Homologs

References

No references are associated with this feature.