Pseudomonas protegens Pf-5, PFL_4104

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4104
Name
Replicon chromosome
Genomic location 4764310 - 4765215 (+ strand)

Cross-References

RefSeq YP_261201.1
GI 70731460
Entrez 3476152
INSDC AAY93365.1
NCBI Locus Tag PFL_4104
UniParc UPI000054DB00
UniProtKB Acc Q4K982
UniProtKB ID Q4K982_PSEF5
UniRef100 UniRef100_Q4K982
UniRef50 UniRef50_Q4K982
UniRef90 UniRef90_Q4K982

Product

Feature Type CDS
Coding Frame 1
Product Name
alpha/beta hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -6.17
Kyte-Doolittle Hydrophobicity Value -0.279
Molecular Weight (kDa) 33351.5
Isoelectric Point (pI) 5.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 312 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020716 (92 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4104

Human Homologs

References

No references are associated with this feature.