Pseudomonas protegens Pf-5, PFL_4170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4170
Name
Replicon chromosome
Genomic location 4844510 - 4845052 (+ strand)

Cross-References

RefSeq YP_261262.1
GI 70731521
Entrez 3476908
INSDC AAY93426.1
NCBI Locus Tag PFL_4170
UniParc UPI000054DB3D
UniProtKB Acc Q4K921
UniProtKB ID Q4K921_PSEF5
UniRef100 UniRef100_Q4K921
UniRef50 UniRef50_G8Q017
UniRef90 UniRef90_Q4K921

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 6.65
Kyte-Doolittle Hydrophobicity Value -0.150
Molecular Weight (kDa) 19.8
Isoelectric Point (pI) 10.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 11 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003128 (484 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4170

Human Homologs

References

No references are associated with this feature.