Pseudomonas protegens Pf-5, PFL_4284

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4284
Name
Replicon chromosome
Genomic location 4979305 - 4979739 (- strand)

Cross-References

RefSeq YP_261376.1
GI 70731635
Entrez 3478408
INSDC AAY93540.1
NCBI Locus Tag PFL_4284
UniParc UPI000054DBAE
UniProtKB Acc Q4K8Q7
UniProtKB ID Q4K8Q7_PSEF5
UniRef100 UniRef100_Q4K8Q7
UniRef50 UniRef50_G8Q1V4
UniRef90 UniRef90_Q4K8Q7

Product

Feature Type CDS
Coding Frame 1
Product Name
DoxX family protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.70
Kyte-Doolittle Hydrophobicity Value 0.976
Molecular Weight (kDa) 14.8
Isoelectric Point (pI) 9.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 165 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002705 (481 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4284

Human Homologs

References

No references are associated with this feature.