Pseudomonas protegens Pf-5, PFL_4346

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4346
Name
Replicon chromosome
Genomic location 5053899 - 5054444 (- strand)

Cross-References

RefSeq YP_261438.1
GI 70731696
Entrez 3478469
INSDC AAY93601.1
NCBI Locus Tag PFL_4346
UniParc UPI000054DBEC
UniProtKB Acc Q4K8J5
UniProtKB ID MTND_PSEF5
UniRef100 UniRef100_Q4K8J5
UniRef50 UniRef50_Q3KFI8
UniRef90 UniRef90_Q4K8J5

Product

Feature Type CDS
Coding Frame 1
Product Name
ARD/ARD' family protein
Synonyms
Evidence for Translation
Charge (pH 7) -11.38
Kyte-Doolittle Hydrophobicity Value -0.327
Molecular Weight (kDa) 20.4
Isoelectric Point (pI) 4.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 102 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003706 (525 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4346

Human Homologs

References

No references are associated with this feature.