Pseudomonas protegens Pf-5, PFL_4415

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4415
Name
Replicon chromosome
Genomic location 5126136 - 5126459 (- strand)

Cross-References

RefSeq YP_261503.2
GI 346643141
Entrez 3478534
INSDC AAY93666.2
NCBI Locus Tag PFL_4415
UniParc UPI00021A0061
UniProtKB Acc Q4K8D0
UniProtKB ID Q4K8D0_PSEF5
UniRef100 UniRef100_Q4K8D0
UniRef50 UniRef50_Q4K8D0
UniRef90 UniRef90_Q4K8D0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 10.64
Kyte-Doolittle Hydrophobicity Value -0.514
Molecular Weight (kDa) 11.9
Isoelectric Point (pI) 11.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015424 (181 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4415

Human Homologs

References

No references are associated with this feature.