Pseudomonas protegens Pf-5, PFL_4416

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4416
Name
Replicon chromosome
Genomic location 5127336 - 5127560 (+ strand)

Cross-References

RefSeq YP_261504.1
GI 70731762
Entrez 3478535
INSDC AAY93667.1
NCBI Locus Tag PFL_4416
UniParc UPI000054DC2E
UniProtKB Acc Q4K8C9
UniProtKB ID Q4K8C9_PSEF5
UniRef100 UniRef100_Q4K8C9
UniRef50 UniRef50_A4XVN7
UniRef90 UniRef90_Q4K8C9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.64
Kyte-Doolittle Hydrophobicity Value -0.088
Molecular Weight (kDa) 8.3
Isoelectric Point (pI) 8.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000778 (505 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4416

Human Homologs

References

No references are associated with this feature.