Pseudomonas protegens Pf-5, PFL_4452 (ldhA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4452
Name
ldhA
Replicon chromosome
Genomic location 5163540 - 5164529 (+ strand)

Cross-References

RefSeq YP_261540.1
GI 70731798
EC Number 1.1.1.28
Entrez 3478571
INSDC AAY93703.1
NCBI Locus Tag PFL_4452
UniParc UPI000054DC51
UniProtKB Acc Q4K893
UniProtKB ID Q4K893_PSEF5
UniRef100 UniRef100_Q4K893
UniRef50 UniRef50_Q4K893
UniRef90 UniRef90_Q4K893

Product

Feature Type CDS
Coding Frame 1
Product Name
D-lactate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -8.45
Kyte-Doolittle Hydrophobicity Value 0.121
Molecular Weight (kDa) 35611.2
Isoelectric Point (pI) 5.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000893 (1006 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4452
Search term: ldhA

Human Homologs

References

No references are associated with this feature.