Pseudomonas protegens Pf-5, PFL_4517 (aotP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4517
Name
aotP
Replicon chromosome
Genomic location 5229729 - 5230493 (- strand)

Cross-References

RefSeq YP_261601.1
GI 70731859
Entrez 3478632
INSDC AAY93764.1
NCBI Locus Tag PFL_4517
UniParc UPI000054DC8D
UniProtKB Acc Q4K832
UniProtKB ID Q4K832_PSEF5
UniRef100 UniRef100_Q4K832
UniRef50 UniRef50_P02915
UniRef90 UniRef90_O30506

Product

Feature Type CDS
Coding Frame 1
Product Name
arginine/ornithine ABC transporter ATP-binding protein AotP
Synonyms
Evidence for Translation
Charge (pH 7) 2.62
Kyte-Doolittle Hydrophobicity Value -0.199
Molecular Weight (kDa) 28.0
Isoelectric Point (pI) 7.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000859 (503 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4517
Search term: aotP

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.0e-18
Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.0e-18
Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.0e-18
Percent Identity: 31.4

References

No references are associated with this feature.