Pseudomonas protegens Pf-5, PFL_4627 (phuR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4627
Name
phuR
Replicon chromosome
Genomic location 5337605 - 5340223 (+ strand)

Cross-References

RefSeq YP_261711.1
GI 70731969
Entrez 3478742
INSDC AAY93874.1
NCBI Locus Tag PFL_4627
UniParc UPI000054DCFB
UniProtKB Acc Q4K7S2
UniProtKB ID Q4K7S2_PSEF5
UniRef100 UniRef100_Q4K7S2
UniRef50 UniRef50_Q4K7S2
UniRef90 UniRef90_Q4K7S2

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent outermembrane heme receptor PhuR
Synonyms
Evidence for Translation
Charge (pH 7) -1.93
Kyte-Doolittle Hydrophobicity Value -0.487
Molecular Weight (kDa) 95322.0
Isoelectric Point (pI) 6.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 335 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000897 (3061 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4627
Search term: phuR

Human Homologs

References

No references are associated with this feature.