Pseudomonas protegens Pf-5, PFL_4802 (dctB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4802
Name
dctB
Replicon chromosome
Genomic location 5543697 - 5545463 (+ strand)

Cross-References

RefSeq YP_261883.1
GI 70732127
EC Number 2.7.13.3
Entrez 3479213
INSDC AAY94032.1
NCBI Locus Tag PFL_4802
UniParc UPI000054DDA6
UniProtKB Acc Q4K7A0
UniProtKB ID Q4K7A0_PSEF5
UniRef100 UniRef100_Q4K7A0
UniRef50 UniRef50_Q4K7A0
UniRef90 UniRef90_Q4K7A0

Product

Feature Type CDS
Coding Frame 1
Product Name
C4-dicarboxylate transport sensor protein DctB
Synonyms
Evidence for Translation
Charge (pH 7) -0.15
Kyte-Doolittle Hydrophobicity Value -0.196
Molecular Weight (kDa) 65599.3
Isoelectric Point (pI) 6.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 612 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005050 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4802
Search term: dctB

Human Homologs

References

No references are associated with this feature.