Pseudomonas protegens Pf-5, PFL_4850 (nth)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4850
Name
nth
Replicon chromosome
Genomic location 5594352 - 5594990 (+ strand)

Cross-References

RefSeq YP_261931.1
GI 70732175
EC Number 4.2.99.18
Entrez 3479261
INSDC AAY94080.1
NCBI Locus Tag PFL_4850
UniParc UPI000054DDD6
UniProtKB Acc Q4K752
UniProtKB ID Q4K752_PSEF5
UniRef100 UniRef100_Q4K752
UniRef50 UniRef50_P44319
UniRef90 UniRef90_Q4K752

Product

Feature Type CDS
Coding Frame 1
Product Name
endonuclease III
Synonyms
Evidence for Translation
Charge (pH 7) 6.28
Kyte-Doolittle Hydrophobicity Value -0.232
Molecular Weight (kDa) 23.8
Isoelectric Point (pI) 8.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002149 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4850
Search term: nth
Search term: endonuclease III

Human Homologs

References

No references are associated with this feature.