Pseudomonas protegens Pf-5, PFL_4913

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4913
Name
Replicon chromosome
Genomic location 5657766 - 5659154 (- strand)

Cross-References

RefSeq YP_261993.1
GI 70732237
Entrez 3479324
INSDC AAY94142.1
NCBI Locus Tag PFL_4913
UniParc UPI000054DE14
UniProtKB Acc Q4K6Z0
UniProtKB ID Q4K6Z0_PSEF5
UniRef100 UniRef100_Q4K6Z0
UniRef50 UniRef50_A0A0A1HX97
UniRef90 UniRef90_Q4K6Z0

Product

Feature Type CDS
Coding Frame 1
Product Name
GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.49
Kyte-Doolittle Hydrophobicity Value -0.033
Molecular Weight (kDa) 50455.2
Isoelectric Point (pI) 6.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 583 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015107 (104 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4913

Human Homologs

References

No references are associated with this feature.