Pseudomonas protegens Pf-5, PFL_4928 (tadA)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_4928
Name	tadA
Replicon	chromosome
Genomic location	5678227 - 5678715 (- strand)

Cross-References

RefSeq	YP_262008.1
GI	70732252
EC Number	3.5.4.-
Entrez	3479339
INSDC	AAY94157.1
NCBI Locus Tag	PFL_4928
UniParc	UPI000054DE23
UniProtKB Acc	Q4K6X5
UniProtKB ID	Q4K6X5_PSEF5
UniRef100	UniRef100_Q4K6X5
UniRef50	UniRef50_Q4K6X5
UniRef90	UniRef90_Q4K6X5

Product

Feature Type	CDS
Coding Frame	1
Product Name	tRNA-specific adenosine deaminase
Synonyms
Evidence for Translation
Charge (pH 7)	1.59
Kyte-Doolittle Hydrophobicity Value	0.108
Molecular Weight (kDa)	17.4
Isoelectric Point (pI)	7.95

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 620 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001914 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_4928 Search term: tadA Search term: tRNA-specific adenosine deaminase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000237283 adenosine deaminase tRNA specific 2 [Source:HGNC Symbol;Acc:HGNC:21172] E-value: 6.9e-11 Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14	ENSP00000332448 adenosine deaminase tRNA specific 3 [Source:HGNC Symbol;Acc:HGNC:25151] E-value: 6.9e-11 Percent Identity: 32.0

References