Pseudomonas protegens Pf-5, PFL_4941

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4941
Name
Replicon chromosome
Genomic location 5694712 - 5695260 (- strand)

Cross-References

RefSeq YP_262021.1
GI 70732265
Entrez 3479352
INSDC AAY94170.1
NCBI Locus Tag PFL_4941
UniParc UPI000054DE30
UniProtKB Acc Q4K6W2
UniProtKB ID Q4K6W2_PSEF5
UniRef100 UniRef100_Q4K6W2
UniRef50 UniRef50_A4VNU9
UniRef90 UniRef90_G8QAB6

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -9.49
Kyte-Doolittle Hydrophobicity Value -0.143
Molecular Weight (kDa) 20.4
Isoelectric Point (pI) 4.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015242 (226 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4941

Human Homologs

References

No references are associated with this feature.