Pseudomonas protegens Pf-5, PFL_4953 (hisS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4953
Name
hisS
Replicon chromosome
Genomic location 5707689 - 5708978 (- strand)

Cross-References

RefSeq YP_262033.1
GI 70732277
EC Number 6.1.1.21
Entrez 3479364
INSDC AAY94182.1
NCBI Locus Tag PFL_4953
UniParc UPI000054DE3C
UniProtKB Acc Q4K6V0
UniProtKB ID SYH_PSEF5
UniRef100 UniRef100_Q4K6V0
UniRef50 UniRef50_Q7N705
UniRef90 UniRef90_Q886Y9

Product

Feature Type CDS
Coding Frame 1
Product Name
histidyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -7.93
Kyte-Doolittle Hydrophobicity Value -0.247
Molecular Weight (kDa) 47.9
Isoelectric Point (pI) 5.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 666 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001864 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4953
Search term: hisS

Human Homologs

References

No references are associated with this feature.