Pseudomonas protegens Pf-5, PFL_4965 (iscS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4965
Name
iscS
Replicon chromosome
Genomic location 5717451 - 5718665 (- strand)

Cross-References

RefSeq YP_262045.1
GI 70732289
EC Number 2.8.1.7
Entrez 3479376
INSDC AAY94194.1
NCBI Locus Tag PFL_4965
UniParc UPI000054DE48
UniProtKB Acc Q4K6T8
UniProtKB ID ISCS_PSEF5
UniRef100 UniRef100_Q4K6T8
UniRef50 UniRef50_Q486Z0
UniRef90 UniRef90_Q4K6T8

Product

Feature Type CDS
Coding Frame 1
Product Name
cysteine desulfurase
Synonyms
Evidence for Translation
Charge (pH 7) -7.23
Kyte-Doolittle Hydrophobicity Value -0.225
Molecular Weight (kDa) 44574.3
Isoelectric Point (pI) 6.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 650 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001852 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4965
Search term: iscS

Human Homologs

Ensembl 110, assembly GRCh38.p14
NFS1 cysteine desulfurase [Source:HGNC Symbol;Acc:HGNC:15910]
E-value: 5.3e-129
Percent Identity: 55.5

References

No references are associated with this feature.