Pseudomonas protegens Pf-5, PFL_5033 (cyoE_1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5033
Name
cyoE_1
Replicon chromosome
Genomic location 5791323 - 5792210 (- strand)

Cross-References

RefSeq YP_262112.1
GI 70732356
EC Number 2.5.1.-
Entrez 3479443
INSDC AAY94261.1
NCBI Locus Tag PFL_5033
UniParc UPI000054DE8B
UniProtKB Acc Q4K6M1
UniProtKB ID CYOE2_PSEF5
UniRef100 UniRef100_Q4K6M1
UniRef50 UniRef50_Q83SF7
UniRef90 UniRef90_Q4K6M1

Product

Feature Type CDS
Coding Frame 1
Product Name
protoheme IX farnesyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) 10.35
Kyte-Doolittle Hydrophobicity Value 0.923
Molecular Weight (kDa) 32.2
Isoelectric Point (pI) 9.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 446 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000111 (993 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5033
Search term: cyoE_1

Human Homologs

References

No references are associated with this feature.