Pseudomonas protegens Pf-5, PFL_5083 (tas)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5083
Name
tas
Replicon chromosome
Genomic location 5844013 - 5845053 (+ strand)

Cross-References

RefSeq YP_262162.1
GI 70732406
Entrez 3479493
INSDC AAY94311.1
NCBI Locus Tag PFL_5083
UniParc UPI000054DEBD
UniProtKB Acc Q4K6H1
UniProtKB ID Q4K6H1_PSEF5
UniRef100 UniRef100_Q4K6H1
UniRef50 UniRef50_D8IYM7
UniRef90 UniRef90_A0A0B7DHQ3

Product

Feature Type CDS
Coding Frame 1
Product Name
oxidoreductase, starvation associated protein Tas
Synonyms
Evidence for Translation
Charge (pH 7) -3.19
Kyte-Doolittle Hydrophobicity Value -0.399
Molecular Weight (kDa) 38770.4
Isoelectric Point (pI) 6.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 532 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004024 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5083
Search term: tas

Human Homologs

References

No references are associated with this feature.