Pseudomonas protegens Pf-5, PFL_5107 (wbjD)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_5107
Name	wbjD
Replicon	chromosome
Genomic location	5869396 - 5870523 (+ strand)

Cross-References

RefSeq	YP_262186.1
GI	70732424
Entrez	3479511
INSDC	AAY94329.1
NCBI Locus Tag	PFL_5107
UniParc	UPI000054DED5
UniProtKB Acc	Q4K6E7
UniProtKB ID	Q4K6E7_PSEF5
UniRef100	UniRef100_Q4K6E7
UniRef50	UniRef50_Q1RIM5
UniRef90	UniRef90_Q4K6E7

Product

Feature Type	CDS
Coding Frame	1
Product Name	UDP-2-acetamido-2,6-dideoxy-beta-L-talose 2-epimerase WbjD
Synonyms
Evidence for Translation
Charge (pH 7)	-6.19
Kyte-Doolittle Hydrophobicity Value	-0.151
Molecular Weight (kDa)	42.3
Isoelectric Point (pI)	6.10

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 422 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002455 (227 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_5107 Search term: wbjD Search term: UDP-2-acetamido-2,6-dideoxy-beta-L-talose 2-epimerase WbjD

Human Homologs

References