Pseudomonas protegens Pf-5, PFL_5165 (prs)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5165
Name
prs
Replicon chromosome
Genomic location 5924445 - 5925386 (+ strand)

Cross-References

RefSeq YP_262243.1
GI 70734363
EC Number 2.7.6.1
Entrez 3481451
INSDC AAY96268.1
NCBI Locus Tag PFL_5165
UniParc UPI000054DF0E
UniProtKB Acc Q4K690
UniProtKB ID Q4K690_PSEF5
UniRef100 UniRef100_A0A083UPK1
UniRef50 UniRef50_Q8PNU0
UniRef90 UniRef90_Q888C6

Product

Feature Type CDS
Coding Frame 1
Product Name
ribose-phosphate pyrophosphokinase
Synonyms
Evidence for Translation
Charge (pH 7) -4.46
Kyte-Doolittle Hydrophobicity Value 0.095
Molecular Weight (kDa) 34.1
Isoelectric Point (pI) 5.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 661 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004320 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5165
Search term: prs

Human Homologs

Ensembl 110, assembly GRCh38.p14
phosphoribosyl pyrophosphate synthetase 2 [Source:HGNC Symbol;Acc:HGNC:9465]
E-value: 5.5e-81
Percent Identity: 48.7

References

No references are associated with this feature.