Pseudomonas protegens Pf-5, PFL_5296 (ndh)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5296
Name
ndh
Replicon chromosome
Genomic location 6063278 - 6064576 (+ strand)

Cross-References

RefSeq YP_262368.1
GI 70732605
EC Number 1.6.99.3
Entrez 3479692
INSDC AAY94510.1
NCBI Locus Tag PFL_5296
UniParc UPI000054DF8A
UniProtKB Acc Q4K5W5
UniProtKB ID Q4K5W5_PSEF5
UniRef100 UniRef100_Q4K5W5
UniRef50 UniRef50_B7LSP8
UniRef90 UniRef90_Q4K5W5

Product

Feature Type CDS
Coding Frame 1
Product Name
NADH dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) 4.52
Kyte-Doolittle Hydrophobicity Value -0.083
Molecular Weight (kDa) 47.0
Isoelectric Point (pI) 8.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 485 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004118 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5296
Search term: ndh

Human Homologs

References

No references are associated with this feature.