Pseudomonas protegens Pf-5, PFL_5318 (ispH)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_5318
Name	ispH
Replicon	chromosome
Genomic location	6083854 - 6084801 (- strand)

Cross-References

RefSeq	YP_262386.1
GI	70732623
EC Number	1.17.1.2
Entrez	3479710
INSDC	AAY94528.1
NCBI Locus Tag	PFL_5318
UniParc	UPI000054DF9C
UniProtKB Acc	Q4K5U7
UniProtKB ID	ISPH_PSEF5
UniRef100	UniRef100_Q4K5U7
UniRef50	UniRef50_Q0BYQ0
UniRef90	UniRef90_Q48NK3

Product

Feature Type	CDS
Coding Frame	1
Product Name	4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Synonyms
Evidence for Translation
Charge (pH 7)	-10.69
Kyte-Doolittle Hydrophobicity Value	-0.174
Molecular Weight (kDa)	34.6
Isoelectric Point (pI)	4.84

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 514 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004216 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_5318 Search term: ispH Search term: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase

Human Homologs

References