Pseudomonas protegens Pf-5, PFL_5343 (gdhA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5343
Name
gdhA
Replicon chromosome
Genomic location 6108594 - 6109931 (- strand)

Cross-References

RefSeq YP_262411.2
GI 346643244
EC Number 1.4.1.4
Entrez 3479735
INSDC AAY94553.2
NCBI Locus Tag PFL_5343
UniParc UPI00021A00C6
UniProtKB Acc Q4K5S2
UniProtKB ID Q4K5S2_PSEF5
UniRef100 UniRef100_Q4K5S2
UniRef50 UniRef50_Q6FD67
UniRef90 UniRef90_Q3K6J3

Product

Feature Type CDS
Coding Frame 1
Product Name
glutamate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -3.33
Kyte-Doolittle Hydrophobicity Value -0.119
Molecular Weight (kDa) 48444.9
Isoelectric Point (pI) 6.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 503 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004246 (475 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5343
Search term: gdhA

Human Homologs

References

No references are associated with this feature.