Pseudomonas protegens Pf-5, PFL_5359 (mscL)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5359
Name
mscL
Replicon chromosome
Genomic location 6129768 - 6130181 (+ strand)

Cross-References

RefSeq YP_262427.1
GI 70732664
Entrez 3479751
INSDC AAY94569.1
NCBI Locus Tag PFL_5359
UniParc UPI000054DFC3
UniProtKB Acc Q4K5Q6
UniProtKB ID MSCL_PSEF5
UniRef100 UniRef100_Q4K5Q6
UniRef50 UniRef50_O68286
UniRef90 UniRef90_Q4K5Q6

Product

Feature Type CDS
Coding Frame 1
Product Name
large-conductance mechanosensitive channel
Synonyms
Evidence for Translation
Charge (pH 7) -0.01
Kyte-Doolittle Hydrophobicity Value 0.712
Molecular Weight (kDa) 14.4
Isoelectric Point (pI) 6.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 400 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004268 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5359
Search term: mscL

Human Homologs

References

No references are associated with this feature.