Pseudomonas protegens Pf-5, PFL_5361 (rlmG)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5361
Name
rlmG
Replicon chromosome
Genomic location 6131220 - 6132344 (+ strand)

Cross-References

RefSeq YP_262429.1
GI 70732666
EC Number 2.1.1.174
Entrez 3479753
INSDC AAY94571.1
NCBI Locus Tag PFL_5361
UniParc UPI000054DFC5
UniProtKB Acc Q4K5Q4
UniProtKB ID RLMG_PSEF5
UniRef100 UniRef100_Q4K5Q4
UniRef50 UniRef50_Q4K5Q4
UniRef90 UniRef90_Q4K5Q4

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal RNA large subunit methyltransferase G
Synonyms
Evidence for Translation
Charge (pH 7) 1.83
Kyte-Doolittle Hydrophobicity Value 0.030
Molecular Weight (kDa) 40525.3
Isoelectric Point (pI) 7.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 191 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004271 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5361
Search term: rlmG

Human Homologs

References

No references are associated with this feature.