Pseudomonas protegens Pf-5, PFL_5394

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5394
Name
Replicon chromosome
Genomic location 6164204 - 6165307 (+ strand)

Cross-References

RefSeq YP_262462.1
GI 70732699
Entrez 3479786
INSDC AAY94604.1
NCBI Locus Tag PFL_5394
UniParc UPI000054DFE6
UniProtKB Acc Q4K5M1
UniProtKB ID Q4K5M1_PSEF5
UniRef100 UniRef100_Q4K5M1
UniRef50 UniRef50_A0A084CDW7
UniRef90 UniRef90_Q4K5M1

Product

Feature Type CDS
Coding Frame 1
Product Name
aldo/keto reductase
Synonyms
Evidence for Translation
Charge (pH 7) 1.67
Kyte-Doolittle Hydrophobicity Value -0.236
Molecular Weight (kDa) 41035.5
Isoelectric Point (pI) 7.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 555 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016443 (53 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5394

Human Homologs

Ensembl 110, assembly GRCh38.p14
aldo-keto reductase family 1 member C2 [Source:HGNC Symbol;Acc:HGNC:385]
E-value: 1.9e-32
Percent Identity: 33.1

References

No references are associated with this feature.