Pseudomonas protegens Pf-5, PFL_5396 (pcaH_2)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_5396
Name	pcaH_2
Replicon	chromosome
Genomic location	6166004 - 6166723 (- strand)

Cross-References

RefSeq	YP_262464.1
GI	70732701
EC Number	1.13.11.3
Entrez	3479788
INSDC	AAY94606.1
NCBI Locus Tag	PFL_5396
UniParc	UPI000054DFE8
UniProtKB Acc	Q4K5L9
UniProtKB ID	Q4K5L9_PSEF5
UniRef100	UniRef100_Q4K5L9
UniRef50	UniRef50_P00437
UniRef90	UniRef90_Q4K5L9

Product

Feature Type	CDS
Coding Frame	1
Product Name	protocatechuate 3,4-dioxygenase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7)	7.55
Kyte-Doolittle Hydrophobicity Value	-0.487
Molecular Weight (kDa)	26.9
Isoelectric Point (pI)	9.36

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 129 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000151 (503 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_5396 Search term: pcaH_2 Search term: protocatechuate 3,4-dioxygenase subunit beta

Human Homologs

References