Pseudomonas protegens Pf-5, PFL_5424 (amn)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5424
Name
amn
Replicon chromosome
Genomic location 6191862 - 6193325 (- strand)

Cross-References

RefSeq YP_262492.1
GI 70732729
EC Number 3.2.2.4
Entrez 3479816
INSDC AAY94634.1
NCBI Locus Tag PFL_5424
UniParc UPI000054E003
UniProtKB Acc Q4K5J1
UniProtKB ID Q4K5J1_PSEF5
UniRef100 UniRef100_Q4K5J1
UniRef50 UniRef50_P0AE13
UniRef90 UniRef90_Q4K5J1

Product

Feature Type CDS
Coding Frame 1
Product Name
AMP nucleosidase
Synonyms
Evidence for Translation
Charge (pH 7) -0.06
Kyte-Doolittle Hydrophobicity Value -0.189
Molecular Weight (kDa) 54.5
Isoelectric Point (pI) 6.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 138 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001709 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5424
Search term: amn
Search term: AMP nucleosidase

Human Homologs

References

No references are associated with this feature.