Pseudomonas protegens Pf-5, PFL_5523 (nrdR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5523
Name
nrdR
Replicon chromosome
Genomic location 6305675 - 6306196 (- strand)

Cross-References

RefSeq YP_262591.3
GI 346643259
Entrez 3479911
INSDC AAY94729.1
NCBI Locus Tag PFL_5523
UniParc UPI00006E2327
UniProtKB Acc Q4K592
UniProtKB ID NRDR_PSEF5
UniRef100 UniRef100_Q4K592
UniRef50 UniRef50_Q4K592
UniRef90 UniRef90_Q4K592

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator NrdR
Synonyms
Evidence for Translation
Charge (pH 7) 1.57
Kyte-Doolittle Hydrophobicity Value -0.432
Molecular Weight (kDa) 20048.0
Isoelectric Point (pI) 7.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 455 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001627 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5523
Search term: nrdR

Human Homologs

References

No references are associated with this feature.