Pseudomonas protegens Pf-5, PFL_5595 (secE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5595
Name
secE
Replicon chromosome
Genomic location 6378760 - 6379128 (- strand)

Cross-References

RefSeq YP_262663.1
GI 70728948
Entrez 3476600
INSDC AAY90853.1
NCBI Locus Tag PFL_5595
UniParc UPI000054E0A6
UniProtKB Acc Q4K520
UniProtKB ID Q4K520_PSEF5
UniRef100 UniRef100_Q4K520
UniRef50 UniRef50_P0AG98
UniRef90 UniRef90_Q1IFX9

Product

Feature Type CDS
Coding Frame 1
Product Name
preprotein translocase subunit SecE
Synonyms
Evidence for Translation
Charge (pH 7) 4.98
Kyte-Doolittle Hydrophobicity Value 0.984
Molecular Weight (kDa) 13.3
Isoelectric Point (pI) 10.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 202 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001435 (442 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5595
Search term: secE

Human Homologs

References

No references are associated with this feature.