Pseudomonas protegens Pf-5, PFL_5607 (tyrS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5607
Name
tyrS
Replicon chromosome
Genomic location 6388506 - 6389705 (- strand)

Cross-References

RefSeq YP_262666.1
GI 70732895
EC Number 6.1.1.1
Entrez 3479982
INSDC AAY94800.1
NCBI Locus Tag PFL_5607
UniParc UPI000054E0A8
UniProtKB Acc Q4K517
UniProtKB ID SYY_PSEF5
UniRef100 UniRef100_Q4K517
UniRef50 UniRef50_P41256
UniRef90 UniRef90_Q88QQ2

Product

Feature Type CDS
Coding Frame 1
Product Name
tyrosyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -7.36
Kyte-Doolittle Hydrophobicity Value -0.224
Molecular Weight (kDa) 44157.3
Isoelectric Point (pI) 5.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 656 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000647 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5607
Search term: tyrS

Human Homologs

References

No references are associated with this feature.