Pseudomonas protegens Pf-5, PFL_5636

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5636
Name
Replicon chromosome
Genomic location 6418837 - 6419661 (- strand)

Cross-References

RefSeq YP_262695.1
GI 70732924
Entrez 3480011
INSDC AAY94829.1
NCBI Locus Tag PFL_5636
UniParc UPI000054E0C5
UniProtKB Acc Q4K4Y8
UniProtKB ID Q4K4Y8_PSEF5
UniRef100 UniRef100_Q4K4Y8
UniRef50 UniRef50_D8NJ10
UniRef90 UniRef90_A4XZI1

Product

Feature Type CDS
Coding Frame 1
Product Name
polyamine ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7) 5.67
Kyte-Doolittle Hydrophobicity Value 1.016
Molecular Weight (kDa) 29.5
Isoelectric Point (pI) 10.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 561 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000589 (513 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5636

Human Homologs

References

No references are associated with this feature.