Pseudomonas protegens Pf-5, PFL_5643

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5643
Name
Replicon chromosome
Genomic location 6427697 - 6428464 (- strand)

Cross-References

RefSeq YP_262702.1
GI 70732931
Entrez 3480018
INSDC AAY94836.1
NCBI Locus Tag PFL_5643
UniParc UPI000054E0CC
UniProtKB Acc Q4K4Y1
UniProtKB ID Q4K4Y1_PSEF5
UniRef100 UniRef100_Q4K4Y1
UniRef50 UniRef50_Q4K4Y1
UniRef90 UniRef90_Q4K4Y1

Product

Feature Type CDS
Coding Frame 1
Product Name
DnaJ domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 17.41
Kyte-Doolittle Hydrophobicity Value -0.447
Molecular Weight (kDa) 28.5
Isoelectric Point (pI) 11.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 147 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000581 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5643

Human Homologs

References

No references are associated with this feature.