Pseudomonas protegens Pf-5, PFL_5668 (quiA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5668
Name
quiA
Replicon chromosome
Genomic location 6458848 - 6461223 (- strand)

Cross-References

RefSeq YP_262726.1
GI 70732954
EC Number 1.1.5.8
Entrez 3480041
INSDC AAY94859.1
NCBI Locus Tag PFL_5668
UniParc UPI000054E0E2
UniProtKB Acc Q4K4V7
UniProtKB ID Q4K4V7_PSEF5
UniRef100 UniRef100_Q4K4V7
UniRef50 UniRef50_A0A085ICY2
UniRef90 UniRef90_Q4K4V7

Product

Feature Type CDS
Coding Frame 1
Product Name
quinate/shikimate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -0.01
Kyte-Doolittle Hydrophobicity Value -0.065
Molecular Weight (kDa) 84740.2
Isoelectric Point (pI) 7.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 151 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016377 (149 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5668
Search term: quiA

Human Homologs

References

No references are associated with this feature.