Pseudomonas protegens Pf-5, PFL_5688

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5688
Name
Replicon chromosome
Genomic location 6484395 - 6484691 (- strand)

Cross-References

RefSeq YP_262746.1
GI 70732973
Entrez 3480060
INSDC AAY94878.1
NCBI Locus Tag PFL_5688
UniParc UPI000054E0F3
UniProtKB Acc Q4K4T7
UniProtKB ID Q4K4T7_PSEF5
UniRef100 UniRef100_Q4K4T7
UniRef50 UniRef50_Q88QW7
UniRef90 UniRef90_Q4K4T7

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.01
Kyte-Doolittle Hydrophobicity Value -0.184
Molecular Weight (kDa) 10.3
Isoelectric Point (pI) 4.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000492 (427 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5688

Human Homologs

References

No references are associated with this feature.