Pseudomonas protegens Pf-5, PFL_5692 (bioF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5692
Name
bioF
Replicon chromosome
Genomic location 6487005 - 6488183 (- strand)

Cross-References

RefSeq YP_262750.1
GI 70732977
EC Number 2.3.1.47
Entrez 3480064
INSDC AAY94882.1
NCBI Locus Tag PFL_5692
UniParc UPI000054E0F7
UniProtKB Acc Q4K4T3
UniProtKB ID BIOF_PSEF5
UniRef100 UniRef100_Q4K4T3
UniRef50 UniRef50_B3PI88
UniRef90 UniRef90_Q4K4T3

Product

Feature Type CDS
Coding Frame 1
Product Name
8-amino-7-oxononanoate synthase
Synonyms
Evidence for Translation
Charge (pH 7) 0.52
Kyte-Doolittle Hydrophobicity Value 0.038
Molecular Weight (kDa) 41902.4
Isoelectric Point (pI) 7.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 507 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000488 (551 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5692
Search term: bioF

Human Homologs

Ensembl 97, assembly GRCh38.p12
glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
E-value: 4.9e-59
Percent Identity: 36.5

References

No references are associated with this feature.