Pseudomonas protegens Pf-5, PFL_5705

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5705
Name
Replicon chromosome
Genomic location 6502942 - 6503919 (+ strand)

Cross-References

RefSeq YP_262763.1
GI 70732990
Entrez 3480077
INSDC AAY94895.1
NCBI Locus Tag PFL_5705
UniParc UPI000054E104
UniProtKB Acc Q4K4S0
UniProtKB ID Q4K4S0_PSEF5
UniRef100 UniRef100_Q4K4S0
UniRef50 UniRef50_Q4K4S0
UniRef90 UniRef90_Q4K4S0

Product

Feature Type CDS
Coding Frame 1
Product Name
FecR/PupR family sigma factor regulatory protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.18
Kyte-Doolittle Hydrophobicity Value -0.322
Molecular Weight (kDa) 36161.0
Isoelectric Point (pI) 9.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 131 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000462 (1708 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5705

Human Homologs

References

No references are associated with this feature.