Pseudomonas protegens Pf-5, PFL_5766 (betI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5766
Name
betI
Replicon chromosome
Genomic location 6568101 - 6568694 (+ strand)

Cross-References

RefSeq YP_262824.1
GI 70733051
Entrez 3480138
INSDC AAY94956.1
NCBI Locus Tag PFL_5766
UniParc UPI000054E141
UniProtKB Acc Q4K4K9
UniProtKB ID BETI_PSEF5
UniRef100 UniRef100_Q4K4K9
UniRef50 UniRef50_Q1QXD9
UniRef90 UniRef90_Q4K4K9

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator BetI
Synonyms
Evidence for Translation
Charge (pH 7) 7.37
Kyte-Doolittle Hydrophobicity Value -0.177
Molecular Weight (kDa) 22.1
Isoelectric Point (pI) 9.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 107 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000241 (6008 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5766
Search term: betI

Human Homologs

References

No references are associated with this feature.