Pseudomonas protegens Pf-5, PFL_5769

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5769
Name
Replicon chromosome
Genomic location 6572344 - 6573786 (+ strand)

Cross-References

RefSeq YP_262827.1
GI 70733054
Entrez 3480141
INSDC AAY94959.1
NCBI Locus Tag PFL_5769
UniParc UPI000054E144
UniProtKB Acc Q4K4K6
UniProtKB ID Q4K4K6_PSEF5
UniRef100 UniRef100_Q4K4K6
UniRef50 UniRef50_G8Q2H0
UniRef90 UniRef90_Q4K4K6

Product

Feature Type CDS
Coding Frame 1
Product Name
TldD/PmbA family protein
Synonyms
Evidence for Translation
Charge (pH 7) -10.97
Kyte-Doolittle Hydrophobicity Value -0.386
Molecular Weight (kDa) 52804.6
Isoelectric Point (pI) 5.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 390 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003038 (479 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5769

Human Homologs

References

No references are associated with this feature.