Pseudomonas protegens Pf-5, PFL_5790

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5790
Name
Replicon chromosome
Genomic location 6598239 - 6598634 (+ strand)

Cross-References

RefSeq YP_262848.2
GI 346643290
Entrez 3480162
INSDC AAY94980.2
NCBI Locus Tag PFL_5790
UniParc UPI00021A00A6
UniProtKB Acc Q4K4I5
UniProtKB ID Q4K4I5_PSEF5
UniRef100 UniRef100_Q4K4I5
UniRef50 UniRef50_W0YM34
UniRef90 UniRef90_Q4K4I5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.62
Kyte-Doolittle Hydrophobicity Value -0.739
Molecular Weight (kDa) 14.5
Isoelectric Point (pI) 8.90

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 36 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000526 (506 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5790

Human Homologs

References

No references are associated with this feature.