Pseudomonas protegens Pf-5, PFL_5837 (pilT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5837
Name
pilT
Replicon chromosome
Genomic location 6645826 - 6646860 (- strand)

Cross-References

RefSeq YP_262895.2
GI 346643296
Entrez 3480209
INSDC AAY95027.2
NCBI Locus Tag PFL_5837
UniParc UPI00021A00B6
UniProtKB Acc Q4K4D8
UniProtKB ID Q4K4D8_PSEF5
UniRef100 UniRef100_Q4K4D8
UniRef50 UniRef50_Q4K4D8
UniRef90 UniRef90_Q4K4D8

Product

Feature Type CDS
Coding Frame 1
Product Name
twitching motility protein PilT
Synonyms
Evidence for Translation
Charge (pH 7) 0.36
Kyte-Doolittle Hydrophobicity Value -0.021
Molecular Weight (kDa) 37388.7
Isoelectric Point (pI) 7.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 517 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000386 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5837
Search term: pilT

Human Homologs

References

No references are associated with this feature.