Pseudomonas protegens Pf-5, PFL_5914

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5914
Name
Replicon chromosome
Genomic location 6724281 - 6724769 (- strand)

Cross-References

RefSeq YP_262972.1
GI 70733199
Entrez 3480286
INSDC AAY95104.1
NCBI Locus Tag PFL_5914
UniParc UPI000054E1D5
UniProtKB Acc Q4K461
UniProtKB ID Q4K461_PSEF5
UniRef100 UniRef100_Q4K461
UniRef50 UniRef50_E7B8E1
UniRef90 UniRef90_Q4K461

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.93
Kyte-Doolittle Hydrophobicity Value 0.093
Molecular Weight (kDa) 16.9
Isoelectric Point (pI) 6.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 164 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000309 (477 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5914

Human Homologs

References

No references are associated with this feature.