Pseudomonas protegens Pf-5, PFL_5947

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5947
Name
Replicon chromosome
Genomic location 6760048 - 6761655 (+ strand)

Cross-References

RefSeq YP_263005.1
GI 70733232
Entrez 3480319
INSDC AAY95137.1
NCBI Locus Tag PFL_5947
UniParc UPI000054E1F6
UniProtKB Acc Q4K428
UniProtKB ID Q4K428_PSEF5
UniRef100 UniRef100_Q4K428
UniRef50 UniRef50_A0A077LQK6
UniRef90 UniRef90_Q4K428

Product

Feature Type CDS
Coding Frame 1
Product Name
methyl-accepting chemotaxis protein
Synonyms
Evidence for Translation
Charge (pH 7) -15.55
Kyte-Doolittle Hydrophobicity Value -0.172
Molecular Weight (kDa) 57.3
Isoelectric Point (pI) 4.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 401 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002972 (907 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5947

Human Homologs

References

No references are associated with this feature.