Pseudomonas protegens Pf-5, PFL_6016

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6016
Name
Replicon chromosome
Genomic location 6835754 - 6836458 (+ strand)

Cross-References

RefSeq YP_263074.1
GI 70733300
Entrez 3480387
INSDC AAY95205.1
NCBI Locus Tag PFL_6016
UniParc UPI000054E239
UniProtKB Acc Q4K3V9
UniProtKB ID Q4K3V9_PSEF5
UniRef100 UniRef100_Q4K3V9
UniRef50 UniRef50_D7I6G3
UniRef90 UniRef90_Q4K3V9

Product

Feature Type CDS
Coding Frame 1
Product Name
HAD-superfamily hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -8.90
Kyte-Doolittle Hydrophobicity Value -0.184
Molecular Weight (kDa) 25993.1
Isoelectric Point (pI) 5.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 383 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004859 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6016

Human Homologs

References

No references are associated with this feature.