Pseudomonas protegens Pf-5, PFL_6019 (amtB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6019
Name
amtB
Replicon chromosome
Genomic location 6837647 - 6838984 (- strand)

Cross-References

RefSeq YP_263077.1
GI 70733303
Entrez 3480390
INSDC AAY95208.1
NCBI Locus Tag PFL_6019
UniParc UPI000054E23C
UniProtKB Acc Q4K3V6
UniProtKB ID Q4K3V6_PSEF5
UniRef100 UniRef100_Q4K3V6
UniRef50 UniRef50_B6JAH3
UniRef90 UniRef90_Q88B15

Product

Feature Type CDS
Coding Frame 1
Product Name
ammonium transporter
Synonyms
Evidence for Translation
Charge (pH 7) -1.69
Kyte-Doolittle Hydrophobicity Value 0.908
Molecular Weight (kDa) 45.9
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 533 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004864 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6019
Search term: amtB

Human Homologs

References

No references are associated with this feature.