Pseudomonas protegens Pf-5, PFL_6058

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6058
Name
Replicon chromosome
Genomic location 6879943 - 6880311 (- strand)

Cross-References

RefSeq YP_263116.1
GI 70733341
Entrez 3480428
INSDC AAY95246.1
NCBI Locus Tag PFL_6058
UniParc UPI000054E261
UniProtKB Acc Q4K3R7
UniProtKB ID Q4K3R7_PSEF5
UniRef100 UniRef100_Q4K3R7
UniRef50 UniRef50_V9R5T4
UniRef90 UniRef90_Q4K3R7

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.40
Kyte-Doolittle Hydrophobicity Value 0.736
Molecular Weight (kDa) 13.6
Isoelectric Point (pI) 7.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 112 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004902 (513 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6058

Human Homologs

References

No references are associated with this feature.