Strain |
Pseudomonas protegens Pf-5
GCF_000012265.1|latest |
Locus Tag |
PFL_6064
|
Name |
|
Replicon | chromosome |
Genomic location | 6885451 - 6885831 (+ strand) |
RefSeq | YP_263122.1 |
GI | 70733347 |
Entrez | 3480434 |
INSDC | AAY95252.1 |
NCBI Locus Tag | PFL_6064 |
UniParc | UPI000054E267 |
UniProtKB Acc | Q4K3R1 |
UniProtKB ID | Q4K3R1_PSEF5 |
UniRef100 | UniRef100_A0A0C5EHH8 |
UniRef50 | UniRef50_A0A0B7DKC4 |
UniRef90 | UniRef90_A0A0B7DKC4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
endoribonuclease L-PSP
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -1.77 |
Kyte-Doolittle Hydrophobicity Value | 0.151 |
Molecular Weight (kDa) | 13.5 |
Isoelectric Point (pI) | 5.11 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
3K0T | SUGAR BINDING PROTEIN | 09/25/09 | Crystal structure of PSPTO -PSP protein in complex with D-beta-Glucose from Pseudomonas syringae pv. tomato str. DC3000 | Pseudomonas syringae pv. tomato | 2.1 | X-RAY DIFFRACTION | 91.9 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 542 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004908 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFL_6064
Search term: endoribonuclease L-PSP
|
Ensembl
110, assembly
GRCh38.p14
|
reactive intermediate imine deaminase A homolog [Source:HGNC Symbol;Acc:HGNC:16897]
E-value:
4.2e-24
Percent Identity:
44.0
|