Pseudomonas protegens Pf-5, PFL_6097

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6097
Name
Replicon chromosome
Genomic location 6929889 - 6930515 (+ strand)

Cross-References

RefSeq YP_263155.1
GI 70733380
Entrez 3480467
INSDC AAY95285.1
NCBI Locus Tag PFL_6097
UniParc UPI000054E288
UniProtKB Acc Q4K3M8
UniProtKB ID Q4K3M8_PSEF5
UniRef100 UniRef100_Q4K3M8
UniRef50 UniRef50_Q4K3M8
UniRef90 UniRef90_Q4K3M8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.11
Kyte-Doolittle Hydrophobicity Value -0.111
Molecular Weight (kDa) 23336.8
Isoelectric Point (pI) 6.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG021009 (2 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6097

Human Homologs

References

No references are associated with this feature.